Seqera

14 tools available

Seqera Platform is an intuitive, centralized command post that enables data analysis at scale, allowing users to launch, manage, and monitor scalable Nextflow pipelines and compute environments on-premises or across cloud providers.

Connect Seqera to Definable to triage issues, review pull requests, monitor builds. Personas call Seqera's 14 tools directly from chat or scheduled flows. Wire it into a triage, review, or release-management persona — every action runs scoped, reviewable, and logged.

Common workflows with Seqera

01

Triage incoming issues

  1. Webhook fires on every new issue
  2. Persona summarises and labels it
  3. Assigns the right engineer
02

Auto-review PRs

  1. Pull the diff
  2. Run a code-review persona
  3. Post structured feedback as PR comment
03

Failing-build alerts

  1. CI sends a failure event
  2. Agent inspects logs and stack trace
  3. Drops a debug summary in Slack
04

Release notes from commits

  1. Read commits since last tag
  2. Group by type with the model
  3. Post to a changelog channel

Seqera actions 14

Every Seqera action below is a callable tool any Definable persona can invoke.

Create Wave Container

Tool to submit a request to Wave for accessing a private container registry or building a container image on-the-fly. Use when you need to provision containers via Wave with Dockerfile, Conda recipe, or package specifications. Returns the name of the container made available by Wave.

Get Organization Details

Tool to retrieve detailed information about a specific organization.

Get Service Info

Tool to retrieve information about the Seqera API service. Use when you need to check the service version and commit ID for troubleshooting.

Get User Info

Tool to retrieve information about the authenticated user. Use when you need to fetch details of the current user after authentication.

Get Wave Build Logs

Tool to get logs for a container build by build ID. Use when you need to troubleshoot or inspect the build process of a Wave container.

Get Wave Build Status

Tool to retrieve the status of a Wave container build by build ID. Use when you need to check if a container build is completed and whether it succeeded.

Inspect Wave Container

Tool to inspect container image metadata via Wave. Use when you need registry, manifest, digest, configuration, and OCI compatibility information about a container image.

List Action Event Types

Tool to list supported action event types. Use when you need to discover available triggers for pipelines, optionally filtered by workspace.

List Compute Environments

Tool to retrieve a list of compute environments. Use when you need to page, sort, or filter compute environments accessible to your account.

List Organizations

Tool to list all organizations. Use after authentication to retrieve accessible Seqera organizations.

List Pipelines

Tool to list all pipelines accessible to the authenticated user. Use when you need to browse pipelines with optional pagination, sorting, or search filters.

List Workflows

Tool to list workflows. Use when you need to retrieve workflows filtered by workspace and paginated.

Validate Action Name

Tool to validate action name. Use when you need to confirm if an action name is valid and available before creating an action. Returns validation status with details.

Validate Pipeline Name

Tool to validate a pipeline name. Use when you need to check if a given pipeline name is valid and available before creating or updating one.

Frequently asked questions

What can I automate with Seqera on Definable?

Anything Seqera exposes through its API. Common developer tools workflows on Definable include triage issues, review pull requests, monitor builds. Personas can call any of the 14 Seqera tools directly, then chain the result into another integration without you writing code.

How does Seqera authentication work?

Seqera uses API_KEY on Definable. You connect once from the integrations page, scoped to the permissions you choose, and from then on any persona that has the integration enabled can act on your behalf. Tokens are encrypted at rest and rotated automatically.

Is the Seqera integration included in my Definable plan?

Yes — every Definable plan, including Starter, includes access to all 14 Seqera tools. You only need a separate Seqera subscription if Seqera itself charges per seat or per API call.

Is using Seqera through Definable secure?

Every call from a persona to Seqera is logged with the user, persona, prompt, and response. Tokens never leave Definable's secrets vault, scopes are configurable per persona, and you can revoke access at any time from the integration page.

How do I get started with Seqera on Definable?

Sign up for Definable, open the integrations page, find Seqera, and connect via OAuth or API key. You can immediately attach Seqera to any persona and start running workflows. The free Starter plan includes 5,000 credits/month.

What Seqera actions does Definable expose?

Definable exposes all 14 Seqera actions as callable tools — including `Create Wave Container`, `Get Organization Details`, `Get Service Info`, plus 11 more. Each tool gets a typed parameter schema so personas know exactly how to call it.

Ready to automate with Seqera?

Wire it up in minutes. No coding required.

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